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BIOTAGE psq assay design software version 1.0.6
Psq Assay Design Software Version 1.0.6, supplied by BIOTAGE, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/assay+design+software+version+1%2E0%2E6/psq+assay+design+software/pmc03740789-241-4-10
Average 90 stars, based on 1 article reviews
psq assay design software version 1.0.6 - by Bioz Stars, 2026-09
90/100 stars

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Polymerase Chain Reaction:

Article Title: Association of GSTM1, GSTT1, GSTP1 and CYP2E1 single nucleotide polymorphisms with colorectal cancer in Iran.
Article Snippet: Colorectal cancer is a major cause of morbidity and mortality both globally and in Iran.. The aim of this study was to determine the association between genetic polymorphisms of glutathione S-transferases P1, M1 and T1 (GSTP1, M1, T1) and susceptibility to colorectal cancer (CRC).. Genotyping of GSTP1, GSTM1 and GSTT1 was performed by the use of pyrosequencing.

Article Title: Characterization of 59 canine single nucleotide polymorphisms in the Italian wolf (Canis lupus) population
Article Snippet: We characterized 59 canine single nucleotide polymorphisms (SNPs) in the endangered Italian wolf ( Canis lupus ) population, which were discovered by resequencing sequencetagged-site (STS) DNA sequences that are known to contain SNPs in domestic dogs.. Dog SNPs were usually found also in wolves.. Additional SNPs unique in dogs or wolves were discovered, which is important for detecting hybrids between dogs and wolves.

Article Title: Molecular characterisation of linezolid resistance in two vancomycin-resistant (VanB) Enterococcus faecium isolates using Pyrosequencing.
Article Snippet: In this paper, we describe the phenotypic and molecular characteristics of two clinically relevant, vancomycin-resistant (VanB), linezolid-resistant Enterococcus faecium isolates.. PyrosequencingTM showed the G to T single nucleotide polymorphism at bp 2576 in the genes coding for 23S rRNA and was used to quantify the proportion of G to T mutations among six different 23S rRNA genes in E. faecium as a marker for the molecular level of resistance to linezolid.. In both isolates, the G to T mutation was found in two of six alleles, and no further mutations in the genes coding for 23S rRNA were found.

Article Title: Fine mapping, physical mapping and development of diagnostic markers for the Rrs2 scald resistance gene in barley.
Article Snippet: Pyrosequencing primers were developed using the Assay Design Software, version 1.0.6 (Biotage AB, Uppsala, Sweden).

Article Title: Collagen gene polymorphisms influence fracture risk and bone mass acquisition during childhood and adolescent growth.
Article Snippet: Contents lists available at ScienceDirect Bone j ourna l homepage: www.e lsev ie r.com/ locate /bone Collagen gene polymorphisms influence fracture risk and bone mass acquisition during childhood and adolescent growth H.Z.. Blades a, P. Arundel a,b,⁎, W.A.. Carlino a, A. Dalton b, J.S.

Article Title: Genome-Wide Analysis of DNA Methylation and the Gene Expression Change in Lung Cancer
Article Snippet: The bisulfite- Copyright © 2011 by the International Association for the Study of Lung Cancer 21 converted sequences were examined by using Assay Design Software version 1.0.6 (Biotage, Uppsala, Sweden).

Article Title: Simultaneous genotyping of the three lactose tolerance-linked polymorphisms LCT –13907C>G, LCT –13910C>T and LCT –13915T>G with Pyrosequencing™ technology
Article Snippet: Background: We required a new genotyping method for the diagnosis of adult hypolactasia, which would allow the simultaneous genotyping of three known polymorphic loci linked to lactose tolerance (LCT –13907C)G, LCT –13910C)T and LCT –13915T)G) in a single PCR/pyrosequencing test run.. Method: We utilized Pyrosequencing technology, a DNA-sequence-by-synthesis technique.. Results: The developed Pyrosequencing method allowed genotyping of the three loci LCT –13907C)G, LCT –13910C)T and LCT –13915T)G in a single PCR/pyrosequencing test run.

Article Title: Inferring continental ancestry of argentineans from Autosomal, Y-chromosomal and mitochondrial DNA.
Article Snippet: Daniel Corach1∗, Oscar Lao2, Cecilia Bobillo1, Kristiaan van Der Gaag3, Sofia Zuniga3, Mark Vermeulen2, Kate van Duijn2, Miriam Goedbloed2, Peter M. Vallone4, Walther Parson5, Peter de Knijff3 and Manfred Kayser2 1Servicio de Huellas Digitales Genéticas and Cátedra de Genética y Biologı́a Molecular, Faculty of Pharmacy and Biochemistry, University of Buenos Aires, Argentina 2Department of Forensic Molecular Biology, Erasmus University Medical Center Rotterdam, Rotterdam, The Netherlands 3Department of Human and Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands 4Biochemical Science Division, National Institute of Standards and Technology, Gaithersburg, Maryland, USA 5Institute of Legal Medicine, Innsbruck Medical University, Austria

Software:

Article Title: Association of GSTM1, GSTT1, GSTP1 and CYP2E1 single nucleotide polymorphisms with colorectal cancer in Iran.
Article Snippet: Colorectal cancer is a major cause of morbidity and mortality both globally and in Iran.. The aim of this study was to determine the association between genetic polymorphisms of glutathione S-transferases P1, M1 and T1 (GSTP1, M1, T1) and susceptibility to colorectal cancer (CRC).. Genotyping of GSTP1, GSTM1 and GSTT1 was performed by the use of pyrosequencing.

Article Title: Characterization of 59 canine single nucleotide polymorphisms in the Italian wolf (Canis lupus) population
Article Snippet: We characterized 59 canine single nucleotide polymorphisms (SNPs) in the endangered Italian wolf ( Canis lupus ) population, which were discovered by resequencing sequencetagged-site (STS) DNA sequences that are known to contain SNPs in domestic dogs.. Dog SNPs were usually found also in wolves.. Additional SNPs unique in dogs or wolves were discovered, which is important for detecting hybrids between dogs and wolves.

Article Title: Molecular characterisation of linezolid resistance in two vancomycin-resistant (VanB) Enterococcus faecium isolates using Pyrosequencing.
Article Snippet: In this paper, we describe the phenotypic and molecular characteristics of two clinically relevant, vancomycin-resistant (VanB), linezolid-resistant Enterococcus faecium isolates.. PyrosequencingTM showed the G to T single nucleotide polymorphism at bp 2576 in the genes coding for 23S rRNA and was used to quantify the proportion of G to T mutations among six different 23S rRNA genes in E. faecium as a marker for the molecular level of resistance to linezolid.. In both isolates, the G to T mutation was found in two of six alleles, and no further mutations in the genes coding for 23S rRNA were found.

Article Title: Fine mapping, physical mapping and development of diagnostic markers for the Rrs2 scald resistance gene in barley.
Article Snippet: Pyrosequencing primers were developed using the Assay Design Software, version 1.0.6 (Biotage AB, Uppsala, Sweden).

Article Title: Collagen gene polymorphisms influence fracture risk and bone mass acquisition during childhood and adolescent growth.
Article Snippet: Contents lists available at ScienceDirect Bone j ourna l homepage: www.e lsev ie r.com/ locate /bone Collagen gene polymorphisms influence fracture risk and bone mass acquisition during childhood and adolescent growth H.Z.. Blades a, P. Arundel a,b,⁎, W.A.. Carlino a, A. Dalton b, J.S.

Article Title: Genome-Wide Analysis of DNA Methylation and the Gene Expression Change in Lung Cancer
Article Snippet: The bisulfite- Copyright © 2011 by the International Association for the Study of Lung Cancer 21 converted sequences were examined by using Assay Design Software version 1.0.6 (Biotage, Uppsala, Sweden).

Article Title: Simultaneous genotyping of the three lactose tolerance-linked polymorphisms LCT –13907C>G, LCT –13910C>T and LCT –13915T>G with Pyrosequencing™ technology
Article Snippet: Background: We required a new genotyping method for the diagnosis of adult hypolactasia, which would allow the simultaneous genotyping of three known polymorphic loci linked to lactose tolerance (LCT –13907C)G, LCT –13910C)T and LCT –13915T)G) in a single PCR/pyrosequencing test run.. Method: We utilized Pyrosequencing technology, a DNA-sequence-by-synthesis technique.. Results: The developed Pyrosequencing method allowed genotyping of the three loci LCT –13907C)G, LCT –13910C)T and LCT –13915T)G in a single PCR/pyrosequencing test run.

Article Title: Inferring continental ancestry of argentineans from Autosomal, Y-chromosomal and mitochondrial DNA.
Article Snippet: Daniel Corach1∗, Oscar Lao2, Cecilia Bobillo1, Kristiaan van Der Gaag3, Sofia Zuniga3, Mark Vermeulen2, Kate van Duijn2, Miriam Goedbloed2, Peter M. Vallone4, Walther Parson5, Peter de Knijff3 and Manfred Kayser2 1Servicio de Huellas Digitales Genéticas and Cátedra de Genética y Biologı́a Molecular, Faculty of Pharmacy and Biochemistry, University of Buenos Aires, Argentina 2Department of Forensic Molecular Biology, Erasmus University Medical Center Rotterdam, Rotterdam, The Netherlands 3Department of Human and Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands 4Biochemical Science Division, National Institute of Standards and Technology, Gaithersburg, Maryland, USA 5Institute of Legal Medicine, Innsbruck Medical University, Austria

Sequencing:

Article Title: Association of GSTM1, GSTT1, GSTP1 and CYP2E1 single nucleotide polymorphisms with colorectal cancer in Iran.
Article Snippet: Colorectal cancer is a major cause of morbidity and mortality both globally and in Iran.. The aim of this study was to determine the association between genetic polymorphisms of glutathione S-transferases P1, M1 and T1 (GSTP1, M1, T1) and susceptibility to colorectal cancer (CRC).. Genotyping of GSTP1, GSTM1 and GSTT1 was performed by the use of pyrosequencing.

Article Title: Characterization of 59 canine single nucleotide polymorphisms in the Italian wolf (Canis lupus) population
Article Snippet: We characterized 59 canine single nucleotide polymorphisms (SNPs) in the endangered Italian wolf ( Canis lupus ) population, which were discovered by resequencing sequencetagged-site (STS) DNA sequences that are known to contain SNPs in domestic dogs.. Dog SNPs were usually found also in wolves.. Additional SNPs unique in dogs or wolves were discovered, which is important for detecting hybrids between dogs and wolves.

Article Title: Molecular characterisation of linezolid resistance in two vancomycin-resistant (VanB) Enterococcus faecium isolates using Pyrosequencing.
Article Snippet: In this paper, we describe the phenotypic and molecular characteristics of two clinically relevant, vancomycin-resistant (VanB), linezolid-resistant Enterococcus faecium isolates.. PyrosequencingTM showed the G to T single nucleotide polymorphism at bp 2576 in the genes coding for 23S rRNA and was used to quantify the proportion of G to T mutations among six different 23S rRNA genes in E. faecium as a marker for the molecular level of resistance to linezolid.. In both isolates, the G to T mutation was found in two of six alleles, and no further mutations in the genes coding for 23S rRNA were found.

Article Title: Fine mapping, physical mapping and development of diagnostic markers for the Rrs2 scald resistance gene in barley.
Article Snippet: Pyrosequencing primers were developed using the Assay Design Software, version 1.0.6 (Biotage AB, Uppsala, Sweden).

Article Title: Collagen gene polymorphisms influence fracture risk and bone mass acquisition during childhood and adolescent growth.
Article Snippet: Contents lists available at ScienceDirect Bone j ourna l homepage: www.e lsev ie r.com/ locate /bone Collagen gene polymorphisms influence fracture risk and bone mass acquisition during childhood and adolescent growth H.Z.. Blades a, P. Arundel a,b,⁎, W.A.. Carlino a, A. Dalton b, J.S.

Article Title: Genome-Wide Analysis of DNA Methylation and the Gene Expression Change in Lung Cancer
Article Snippet: The bisulfite- Copyright © 2011 by the International Association for the Study of Lung Cancer 21 converted sequences were examined by using Assay Design Software version 1.0.6 (Biotage, Uppsala, Sweden).

Article Title: Simultaneous genotyping of the three lactose tolerance-linked polymorphisms LCT –13907C>G, LCT –13910C>T and LCT –13915T>G with Pyrosequencing™ technology
Article Snippet: Background: We required a new genotyping method for the diagnosis of adult hypolactasia, which would allow the simultaneous genotyping of three known polymorphic loci linked to lactose tolerance (LCT –13907C)G, LCT –13910C)T and LCT –13915T)G) in a single PCR/pyrosequencing test run.. Method: We utilized Pyrosequencing technology, a DNA-sequence-by-synthesis technique.. Results: The developed Pyrosequencing method allowed genotyping of the three loci LCT –13907C)G, LCT –13910C)T and LCT –13915T)G in a single PCR/pyrosequencing test run.

Article Title: Inferring continental ancestry of argentineans from Autosomal, Y-chromosomal and mitochondrial DNA.
Article Snippet: Daniel Corach1∗, Oscar Lao2, Cecilia Bobillo1, Kristiaan van Der Gaag3, Sofia Zuniga3, Mark Vermeulen2, Kate van Duijn2, Miriam Goedbloed2, Peter M. Vallone4, Walther Parson5, Peter de Knijff3 and Manfred Kayser2 1Servicio de Huellas Digitales Genéticas and Cátedra de Genética y Biologı́a Molecular, Faculty of Pharmacy and Biochemistry, University of Buenos Aires, Argentina 2Department of Forensic Molecular Biology, Erasmus University Medical Center Rotterdam, Rotterdam, The Netherlands 3Department of Human and Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands 4Biochemical Science Division, National Institute of Standards and Technology, Gaithersburg, Maryland, USA 5Institute of Legal Medicine, Innsbruck Medical University, Austria



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